CDS

Accession Number TCMCG057C29963
gbkey CDS
Protein Id XP_018491352.1
Location join(45546901..45546923,45561362..45561523,45561981..45562036,45562394..45562485,45562615..45562717,45562812..45562949,45563046..45563296)
Gene LOC108861876
GeneID 108861876
Organism Raphanus sativus

Protein

Length 274aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018635850.1
Definition PREDICTED: isopentenyl-diphosphate Delta-isomerase II, chloroplastic [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category Q
Description Isopentenyl-diphosphate delta-isomerase
KEGG_TC -
KEGG_Module M00095        [VIEW IN KEGG]
M00096        [VIEW IN KEGG]
M00364        [VIEW IN KEGG]
M00365        [VIEW IN KEGG]
M00366        [VIEW IN KEGG]
M00367        [VIEW IN KEGG]
KEGG_Reaction R01123        [VIEW IN KEGG]
KEGG_rclass RC00455        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K01823        [VIEW IN KEGG]
EC 5.3.3.2        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00900        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
ko01130        [VIEW IN KEGG]
map00900        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
map01130        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006629        [VIEW IN EMBL-EBI]
GO:0006644        [VIEW IN EMBL-EBI]
GO:0006720        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008299        [VIEW IN EMBL-EBI]
GO:0008610        [VIEW IN EMBL-EBI]
GO:0008654        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009240        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009908        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0019637        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044255        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046490        [VIEW IN EMBL-EBI]
GO:0048367        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090407        [VIEW IN EMBL-EBI]
GO:0090567        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCTGCTTCTTCTTTATTTAATTTCCCATTGATTCGCCTCAGATCTCTCTCCCATCTCCCTCCGTCATCTCTCCGATCCGTTTCTCAGAGAAAGTTACCGACTTTTCGAGCTTTCTCCGGTACTACCACAATGACAGATGCTGGAATGGATGCTGTTCAGAGACGCCTCATGTTCGAAGACGAATGCATTCTTGTTGACGAAACTGATCGTGTTGTGGGGCATGACAGCAAATATAATTGTCATCTGATGGAAAATATTGAAGCTAAGAATCTGCTTCACAGGGCTTTTAGTGTATTTTTATTCAACTCCAACTATGACTTGCTTCTCCAGCAAAGGTCGAAAGCAAAGGTGACCTTCCCTCTAGTGTGGACAAACACTTGTTGCAGCCATCCTCTTTACCGTGAATCTGAGCTTATCGAGGAAAATACTCTCGGTGTGAGGAATGCTGCACAGAGAAAGCTTCTTGACGAGCTCGGTATTGTAGCTGAAGATGTACCAGTCGATGAGTTCACTCCTCTGGGACGTATGCTTTACAAGGCTCCTTCTGATGGCAAATGGGGAGAGCACGAACTGGACTACTTACTGTTCATTGTGAGGGATGTTAAGGTTCAACCAAATCCAGATGAAGTAGCAGATATCAAGTATGTGAGCAGGGAAGAGCTGAAGGAGCTGGTGAAGAGAGCAGATGCAGGGGAGGAAGGTCTGAAACTATCTCCATGGTTCAGATTGGTGGTGGATAACTTCTTGATGAAGTGGTGGGATCATGTTGAGAAAGGGACTCTGAGTGAAGCTGTAGACATGAAAACCATTCACAAGCTCTGA
Protein:  
MSASSLFNFPLIRLRSLSHLPPSSLRSVSQRKLPTFRAFSGTTTMTDAGMDAVQRRLMFEDECILVDETDRVVGHDSKYNCHLMENIEAKNLLHRAFSVFLFNSNYDLLLQQRSKAKVTFPLVWTNTCCSHPLYRESELIEENTLGVRNAAQRKLLDELGIVAEDVPVDEFTPLGRMLYKAPSDGKWGEHELDYLLFIVRDVKVQPNPDEVADIKYVSREELKELVKRADAGEEGLKLSPWFRLVVDNFLMKWWDHVEKGTLSEAVDMKTIHKL